Praveer Singh, PhD

Publications

• Ostmo, S., Lin, W.C., Coyner, A.S., Singh, P., Kalpathy-Cramer, J., Erdogmus, D., Chan, R.V.P., Chiang, M.F. and Campbell, J.P., "Integrating Clinical, Imaging, and Genetic Data for Severe ROP Prediction." Investigative Ophthalmology & Visual Science, 65(7), 4290-4290. (2024).
• Young, B., Lin, W.C., Coyner, A.S., Ostmo, S.R., Singh, P., Kalpathy-Cramer, J., Erdogmus, D., Chan, R.V.P., Chiang, M.F. and Campbell, J.P., "Deep Learning-Based Prediction of Genetic Risk in Retinopathy of Prematurity Using Retinal Images". Investigative Ophthalmology & Visual Science, 65(7), pp.3764-3764. (2024).
• Chuter, B., Kinder, S., Huynh, J., Gonzalez, R., Iyengar, S., Xu, B., Zebardast, N., Eslami, M., Kazeminasab, S., Elze, T., Christopher, M., Zangwill, M., Kalpathy-Cramer, J., Singh, P., & Baxter, S. "The Case for Federated Learning: Challenges and Opportunities in Multi-Institutional Deep Learning Approaches for Ophthalmic Imaging." Investigative Ophthalmology & Visual Science, 65(9), pp.PP007-PP007. (2024)
• McNamara, S., Veturi, A., Kinder, S., Clark, C., Thakuria, U., Bearce, B., Kahook, M.Y., Mandava, N., Manoharan N., Singh, P., Kalpathy-Cramer, J., "EyeLiner: Longitudinal retinal fundus image alignment through clinically guided keypoint detection." Clinical Translation of Medical Image Computing and Computer Assisted Interventions. (2024).
• Clark, C., Kinder, S., Ahmed, S.R., Nebbia, G., Veturi, A., Singh, P., Kalpathy-Cramer, J., "Making the most of limited data with self-supervised learning for breast cancer screening." MICCAI 2024 2nd International Workshop on Foundation Models for General Medical AI. (2024).
• Nebbia, G., McNamara, S., Singh, P., Kalpathy-Cramer, J., "Comparing the Ability of CFP and OCT to Predict Demographic Information." 10th MICCAI Workshop on Ophthalmic Medical Image Analysis. (2024).
• Nebbia, G., McNamara, S., Singh, P., Kalpathy-Cramer, J., "Assessing the Ability of Foundational Models to Re-identify Patients from Ophthalmic Images." 10th MICCAI Workshop on Ophthalmic Medical Image Analysis. (2024).
• Clark, C., Kinder, S., Egemen, D., Befano, B., Desai, K., Ahmed, S. R., Singh, P., ... & Kalpathy-Cramer, J., "Conformal Prediction and Monte Carlo Inference for Addressing Uncertainty in Cervical Cancer Screening." In International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging (pp. 205-214). Cham: Springer Nature Switzerland. (2024).
• Gupta, S., Chang, K., Qu, L., Rana, A., Ahmed, S. R., Aggarwal, M., ... & Singh, P., "Addressing Catastrophic Forgetting by Modulating Global Batch Normalization Statistics for Medical Domain Expansion". In International Workshop on Personalized Incremental Learning in Medicine (pp. 57-72). Cham: Springer Nature Switzerland. (2024).
• Rathi, L., Nebbia, G., Chang, K., Kumar, S., Gupta, A., Ahmed, S. R., ... & Singh, P., "Cycle-GANs Generated Difference Maps to Interpret Race Prediction from Medical Images". In MICCAI Workshop on Fairness of AI in Medical Imaging (pp. 129-139). Cham: Springer Nature Switzerland.(2024).
• Kumar, S., Hu, S.X., Coyner, A.S., Lin, W.C., Ostmo, S., Erdogmus, D., Chan, R.P., Chiang, M.F., Campbell, J.P., Kalpathy-cramer, J, Hospedales, T., & Singh, P., "Monitoring disease progression with stable diffusion-a visual approach". In Medical Imaging with Deep Learning.(2024).
• Lin, W., Jordan, B.K., Scottoline, B., Ostmo, S., Coyner, A., Singh, P., Kalpathy-Cramer, J., Erdogmus, D., Chan, R.V.P., Chiang, M.F., Campbell J.P., "Oxygenation Fluctuations Associated with Severe Retinopathy of Prematurity: Insights from A Multimodal Deep Learning Approach." Ophthalmology Science.(2024)
• Coyner, A.S., Murickan, T., Oh, M.A., Young, B.K., Ostmo, S.R.,Singh, P., Chan, R.P., Moshfeghi, D.M., Shah, P.K., Venkatapathy, N., Chiang, M.F., Kalpathy-Cramer, J., Campbell J.P., "Multinational external validation of autonomous retinopathy of prematurity screening. JAMA Ophthalmology, 142(4), pp.327-335. (2024)
• Kim, A. E., Lou, K. W., Giobbie-Hurder, A., Chang, K., Gidwani, M., Hoebel, K.,Patel, J.B., Cleveland, M.C., Singh, P., Bridge, C.P., Ahmed, S.R. ... & Gerstner, E. R, "Abnormal vascular structure and function within brain metastases is linked to pembrolizumab resistance.", Neuro-oncology, 26(5), 965-974. (2024).
• Pati, S., Kumar, S., Varma, A., Edwards, B., Lu, C., Qu, L., Wang, J.J., Lakshminarayanan, A., Wang, S.H., Sheller, M.J., Chang, K., Singh, P., Rubin, D.L., Kalpathy-Cramer, J. & Bakas, S. 2024. "Privacy preservation for federated learning in health care." Patterns, 5(7). (2024).
• Hallaj, S., Chuter, B.G., Lieu, A.C., Singh, P., Kalpathy-Cramer, J., Xu, B.Y., Christopher, M., Zangwill, L.M., Weinreb, R.N. and Baxter, S.L., "Federated Learning in Glaucoma: A Comprehensive Review and Future Perspectives". Ophthalmology Glaucoma. (2024)
• Singh, P., Kumar, S., Harel, I. D., Dollberg, D., Rachapudi, N., Laíns, I., Husain, D., Kalpathy-Cramer, J., "A Deep Learning based Automatic Drusen Segmentation Model for Age Related Macular Degeneration in Ultra Wide-Field Imaging." Investigative Ophthalmology & Visual Science, 65(7), 2416-2416. (2024).
• Kinder, S., McNamara, S., Clark, C., Veturi, A., Dietz, G., Carlo, T., Kahook, M.Y., Singh, P., Kalpathy- Cramer, J., "AI-based Optic Disc and Cup Segmentation Can Provide Consistent Cup-Disc Ratio (CDR) Measurements and Precise Progression Tracking." Investigative Ophthalmology & Visual Science, 65(7), 6189- 6189. (2024).
• Kumar, S., Hu, S. X., Coyner A. S., Lin W. C., Ostmo, S., Erdogmus, D., Chan, R.V.P., Chiang, M.F., Campbell, J.P., Kalpathy-Cramer, J., Hospedales,T.M., Singh, P., "Monitoring Disease Progression with Stable Diffusion in Retinopathy of Prematurity." Investigative Ophthalmology & Visual Science, 65(7), 5653- 5653. (2024).
• Clark, C., Ahmed, S.R., Kinder, S., Veturi, A., Thakuria, U., Bearce, B., Singh, P., Kalpathy-Cramer, J., "Towards an Optimal (Self)-Supervised Learning Paradigm for Diabetic Retinopathy Classification." Investigative Ophthalmology & Visual Science, 65(7), 5658-5658. (2024).
• McNamara, S., Bearce, B., Kinder, S., Veturi, A., Clark, C., Gnanaraj, R., Manoharan, N., Carlo, T., Mandava, N., Kahook, M.Y., Singh, P., Kalpathy-Cramer, J., "OPTIMEyes: An Annotation and Inference Feedback Tool for Multimodal Ophthalmic Imaging." Investigative Ophthalmology & Visual Science, 65(7), 2377-2377. (2024).
• Veturi, A., McNamara, S., Kinder, S., Clark, C., Bearce, B., Mandava, N., Kahook, M.Y., Singh, P., Kalpathy- Cramer, J., "EyeLiner: Longitudinal retinal fundus image alignment through clinically guided keypoint detection." Investigative Ophthalmology & Visual Science, 65(7), 2376-2376. (2024).
• Bearce, B., McNamara, S., Kinder, S., Veturi, A., Clark, C., Dietz, G., Wangyu, S., Mandava, N., Kahook, M.Y., Singh, P., Kalpathy-Cramer, J., "Disease Progression in Ophthalmic Images via Flicker Overlay." Investigative Ophthalmology & Visual Science, 65(7), 1649-1649. (2024).
• Singh, P., Tyagi, R., Jordan, B.K., Scottoline, B., Ostmo, S., Coyner, A.S., Lin, W.C., Erdogmus, D., Chan, R.V.P., McEvoy, C. ,Chiang, M.F., Campbell, J.P., Kalpathy-Cramer, J., "Can the eye be a window to your body? AI predicts Neonatal Pulmonary Hypertension through Retinal Fundus Photographs." Investigative Ophthalmology & Visual Science, 64(8), pp.1877-1877. (2023).
• Tyagi, R., Campbell, J.P., Coyner, A.S., Ostmo, S., Lin, W.C., Erdogmus, D., Chan, R.V.P., Chiang, M.F., Kalpathy-Cramer, J. and Singh, P., "Investigating AI’s Unreasonable Effectiveness in Detecting Self-Declared Racial Identity from Retinal Vascular Maps." Investigative Ophthalmology & Visual Science, 64(8), pp.273-273. (2023).
• Coyner, A.S., Lemay, A., Hoebel, K., Singh, P., Ostmo, S., Chiang, M.F., Kalpathy-Cramer, J. and Campbell, J.P., "Monte Carlo dropout for increased deep learning repeatability and disease classification performance in retinopathy of prematurity." Investigative Ophthalmology & Visual Science, 64(8), pp.5124-5124. (2023).
• Kalpathy-Cramer, J., Alryalat, S.A., Clark, C., Singh, P., Bearce, B., Ittoop, S., Gomez, G.L., Seibold, L. and Kahook, M., "Inter-rater variability in glaucoma diagnosis using optic nerve head photographs." Investigative Ophthalmology & Visual Science, 64(8), pp.372-372. (2023).
• Lin, W.C., Ostmo, S., Coyner, A.S., Singh, P., Kalpathy-Cramer, J., Erdogmus, D., Chan, R.V.P., Chiang, M.F. and Campbell, J.P., "A Multimodal Deep Learning Approach Towards Predicting Severe Retinopathy of Prematurity." Investigative Ophthalmology & Visual Science, 64(8), pp.4934-4934. (2023).
• Hoebel, K.V., Lemay, A., Campbell, J.P., Ostmo, S., Chiang, M.F., Bridge, C.P., Li, M.D., Singh, P., Coyner, A.S. and Kalpathy-Cramer, J., "A generalized framework to predict continuous scores from medical ordinal labels." arXiv preprint arXiv:2305.19097. (2023).
• Kim AE, Lou KW, Giobbie-Hurder A, Chang K, Gidwani M, Hoebel K, Patel JB, Cleveland MC, Singh P, Bridge CP, Ahmed SR, Bearce BA, Liu W, Fuster-Garcia E, Lee EQ, Lin NU, Overmoyer B, Wen PY, Nayak L, Cohen JV, Dietrich J, Eichler A, Heist R, Krop I, Lawrence D, Ligibel J, Tolaney S, Mayer E, Winer E, Perrino CM, Summers EJ, Mahar M, Oh K, Shih HA, Cahill DP, Rosen BR, Yen YF, Kalpathy-Cramer J, Martinez-Lage M, Sullivan RJ, Brastianos PK, Emblem KE, Gerstner ER. Abnormal vascular structure and function within brain metastases is linked to pembrolizumab resistance. Neuro Oncol. 2023 Dec 9. [Epub ahead of print] PubMed PMID: 38070147
• Kim AE, Lou KW, Giobbie-Hurder A, Chang K, Gidwani M, Hoebel K, Patel JB, Cleveland MC, Singh P, Bridge CP, Ahmed SR, Bearce BA, Liu W, Fuster-Garcia E, Lee EQ, Lin NU, Overmoyer B, Wen PY, Nayak L, Cohen JV, Dietrich J, Eichler A, Heist R, Krop I, Lawrence D, Ligibel J, Tolaney S, Mayer E, Winer E, Perrino CM, Summers EJ, Mahar M, Oh K, Shih HA, Cahill DP, Rosen BR, Yen YF, Kalpathy-Cramer J, Martinez-Lage M, Sullivan RJ, Brastianos PK, Emblem KE, Gerstner ER. Structural and functional vascular dysfunction within brain metastases is linked to pembrolizumab inefficacy. bioRxiv. 2023 Aug 28. PubMed PMID: 37693537
• Bhandari SM, Singh P, Arun N, Sekimitsu S, Raghu V, Rauscher FG, Elze T, Horn K, Kirsten T, Scholz M, Segrè AV, Wiggs JL, Kalpathy-Cramer J, Zebardast N. Automated detection of genetic relatedness from fundus photographs using Siamese Neural Networks. medRxiv. 2023 Aug 23. PubMed PMID: 37662422
• AlRyalat SA, Singh P, Kalpathy-Cramer J, Kahook MY. Artificial Intelligence and Glaucoma: Going Back to Basics. Clin Ophthalmol. 2023;17:1525-1530. PubMed PMID: 37284059
• Young BK, Cole ED, Shah PK, Ostmo S, Subramaniam P, Venkatapathy N, Tsai ASH, Coyner AS, Gupta A, Singh P, Chiang MF, Kalpathy-Cramer J, Chan RVP, Campbell JP. Efficacy of Smartphone-Based Telescreening for Retinopathy of Prematurity With and Without Artificial Intelligence in India. JAMA Ophthalmol. 2023 Jun 1;141(6):582-588. PubMed PMID: 37166816
• Coyner AS, Singh P, Brown JM, Ostmo S, Chan RVP, Chiang MF, Kalpathy-Cramer J, Campbell JP. Association of Biomarker-Based Artificial Intelligence With Risk of Racial Bias in Retinal Images. JAMA Ophthalmol. 2023 Jun 1;141(6):543-552. PubMed PMID: 37140902
• deCampos-Stairiker MA, Coyner AS, Gupta A, Oh M, Shah PK, Subramanian P, Venkatapathy N, Singh P, Kalpathy-Cramer J, Chiang MF, Chan RVP, Campbell JP. Epidemiologic Evaluation of Retinopathy of Prematurity Severity in a Large Telemedicine Program in India Using Artificial Intelligence. Ophthalmology. 2023 Aug;130(8):837-843. PubMed PMID: 37030453
• Gupta S, Kumar S, Chang K, Lu C, Singh P, Kalpathy-Cramer J. Collaborative Privacy-preserving Approaches for Distributed Deep Learning Using Multi-Institutional Data. Radiographics. 2023 Apr;43(4):e220107. PubMed PMID: 36862082
• Gidwani M, Chang K, Patel JB, Hoebel KV, Ahmed SR, Singh P, Fuller CD, Kalpathy-Cramer J. Inconsistent Partitioning and Unproductive Feature Associations Yield Idealized Radiomic Models. Radiology. 2023 Apr;307(1):e220715. PubMed PMID: 36537895
• Byun, Y., Garg, S., Mehta, S.V., Singh, P., Kalpathy-cramer, J., Wilder, B. and Lipton, Z.C., "Conditional Diffusion Replay for Continual Learning in Medical Settings." ICML Workshop on Deployment Challenges for Generative AI, (2023).
• Patel, J., Ahmed, S. R., Chang, K., Singh, P., Gidwani, M., Hoebel, K., Kim, A., Bridge, C.P., Teng, C.J., Li, X., Xu, G., McDonald, M., Aizer, A., Bi,W.L., Ly, K.I., Rosen, B., Brastianos, P., Huang, R., Gerstner, E., Kalpathy-Cramer, J., "A Deep Learning Based Framework for Joint Image Registration and Segmentation of Brain Metastases on Magnetic Resonance Imaging." Machine Learning for Healthcare Conference (pp. 565-587). PMLR., (2023).
• Lu, R.Y., McNamara, S., Singh, P., Kahook, M.Y., Mandava, N., Kalpathy-Cramer, J., "Fusing Vision and Language: A Multimodal Deep Learning Framework to Predict Fundus Image Diagnosis & Eye Laterality from Generated Free Text." Investigative Ophthalmology & Visual Science, 65(7), 5923-5923. (2024).