Yildiz O, Downes GB, Sagerström CG. Zebrafish prdm12b acts independently of nkx6.1 repression to promote eng1b expression in the neural tube p1 domain. Neural Dev. 2019 Feb 27;14(1):5. PubMed PMID: 30813944
Stanney W 3rd, Ladam F, Donaldson IJ, Parsons TJ, Maehr R, Bobola N, Sagerström CG. Combinatorial action of NF-Y and TALE at embryonic enhancers defines distinct gene expression programs during zygotic genome activation in zebrafish. Dev Biol. 2020 Mar 15;459(2):161-180. PubMed PMID: 31862379
Bridoux L, Zarrineh P, Mallen J, Phuycharoen M, Latorre V, Ladam F, Losa M, Baker SM, Sagerstrom C, Mace KA, Rattray M, Bobola N. HOX paralogs selectively convert binding of ubiquitous transcription factors into tissue-specific patterns of enhancer activation. PLoS Genet. 2020 Dec;16(12):e1009162. PubMed PMID: 33315856
Ladam F, Stanney W, Donaldson IJ, Yildiz O, Bobola N, Sagerström CG. TALE factors use two distinct functional modes to control an essential zebrafish gene expression program. Elife. 2018 Jun 18;7. PubMed PMID: 29911973
Ghosh P, Maurer JM, Sagerström CG. Analysis of novel caudal hindbrain genes reveals different regulatory logic for gene expression in rhombomere 4 versus 5/6 in embryonic zebrafish. Neural Dev. 2018 Jun 26;13(1):13. PubMed PMID: 29945667
Bhandari S, Hong K, Miyawaki-Kuwakado A, Tomimatsu K, Kim YI, Nam IK, Sagerstrom CG, Nakamura M, Choe SK. nudt7 gene depletion causes transcriptomic change in early development of zebrafish. J Biochem. 2022 Oct 21. [Epub ahead of print] PubMed PMID: 36270274
TALE Transcription Factors: Hox cofactors no more. Seminars in Cell and Developmental Biology
Bobola N, Sagerström CG. TALE transcription factors: Cofactors no more. Semin Cell Dev Biol. 2024 Jan-Feb;152-153:76-84. PubMed PMID: 36509674
Kim YI, O'Rourke R, Sagerström CG. scMultiome analysis identifies embryonic hindbrain progenitors with mixed rhombomere identities. bioRxiv. 2023 Jan 28. PubMed PMID: 36747868
Warns J, Kim YI, O'Rourke R, Sagerström CG. scMultiome analysis identifies a single caudal hindbrain compartment in the developing zebrafish nervous system. Neural Dev. 2024 Jul 5;19(1):12. PubMed PMID: 38970093
Kim YI, O'Rourke R, Sagerström CG. scMultiome analysis identifies embryonic hindbrain progenitors with mixed rhombomere identities. Elife. 2023 Nov 10;12. PubMed PMID: 37947350
Bobola N, Sagerström CG. TALE transcription factors: Cofactors no more. Semin Cell Dev Biol. 2024 Jan-Feb;152-153:76-84. PubMed PMID: 36509674