Daniel Denman, PhD

Publications

• Bayman E, Chee K, Mendlen M, Denman DJ, Tien RN, Ojemann S, Kramer DR, Thompson JA. Subthalamic nucleus synchronization between beta band local field potential and single-unit activity in Parkinson's disease. Physiol Rep. 2024 May;12(9):e16001. doi: 10.14814/phy2.16001. PMID: 38697943; PMCID: PMC11065686.
• Mohammadi Z, Denman DJ, Klug A, Lei TC. A fully automatic multichannel neural spike sorting algorithm with spike reduction and positional feature. J Neural Eng. 2024 Aug 5;21(4):046039. doi: 10.1088/1741-2552/ad647d. PMID: 39019065; PMCID: PMC11298775.
• Juan Gabriel Santiago Moreno, Daniel J Denman; COMPARISON OF HIGH THROUGHPUT RECEPTIVE FIELD MAPPING APPROACHES FOR HIGH DENSITY ELECTROPHYSIOLOGY IN MICE. Invest. Ophthalmol. Vis. Sci. 2023;64(8):38.
• Wei, Y., Nandi, A., Jia, X., Siegle, J.H., Denman, D., Lee, S.Y., Buchin, A., Van Geit, W., Mosher, C.P., Olsen, S. and Anastassiou, C.A., 2023. Associations between in vitro, in vivo and in silico cell classes in mouse primary visual cortex. Nature Communications, 14(1), p.2344.
• Siegle JH, Jia X, Durand S, Gale S, Bennett C, Graddis N, Heller G, Ramirez TK, Choi H, Luviano JA, Groblewski PA, Ahmed R, Arkhipov A, Bernard A, Billeh YN, Brown D, Buice MA, Cain N, Caldejon S, Casal L, Cho A, Chvilicek M, Cox TC, Dai K, Denman DJ, de Vries SEJ, Dietzman R, Esposito L, Farrell C, Feng D, Galbraith J, Garrett M, Gelfand EC, Hancock N, Harris JA, Howard R, Hu B, Hytnen R, Iyer R, Jessett E, Johnson K, Kato I, Kiggins J, Lambert S, Lecoq J, Ledochowitsch P, Lee JH, Leon A, Li Y, Liang E, Long F, Mace K, Melchior J, Millman D, Mollenkopf T, Nayan C, Ng L, Ngo K, Nguyen T, Nicovich PR, North K, Ocker GK, Ollerenshaw D, Oliver M, Pachitariu M, Perkins J, Reding M, Reid D, Robertson M, Ronellenfitch K, Seid S, Slaughterbeck C, Stoecklin M, Sullivan D, Sutton B, Swapp J, Thompson C, Turner K, Wakeman W, Whitesell JD, Williams D, Williford A, Young R, Zeng H, Naylor S, Phillips JW, Reid RC, Mihalas S, Olsen SR, Koch C. Survey of spiking in the mouse visual system reveals functional hierarchy. Nature. 2021 Apr;592(7852):86-92. doi: 10.1038/s41586-020-03171-x. Epub 2021 Jan 20. PMID: 33473216.
• Siegle JH, Ledochowitsch P, Jia X, Millman DJ, Ocker GK, Caldejon S, Casal L, Cho A, Denman DJ, Durand S, Groblewski PA, Heller G, Kato I, Kivikas S, Lecoq J, Nayan C, Ngo K, Nicovich PR, North K, Ramirez TK, Swapp J, Waughman X, Williford A, Olsen SR, Koch C, Buice MA, de Vries SE. Reconciling functional differences in populations of neurons recorded with two-photon imaging and electrophysiology. Elife. 2021 Jul 16;10:e69068. doi: 10.7554/eLife.69068. PMID: 34270411; PMCID: PMC8285106.
• Abbasi Asl R, Muslim A, Larkin J, Takasaki K, Millman D, Denman DJ, Lecoq J, Arkhipov A, Gouwens NW , Waters J, Reid RC, de Vries SEJ; A large-scale standardized survey of neural receptive fields in an entire column in mouse V1. Journal of Vision 2021;21(9):2901.
• Reconciling functional differences in populations of neurons recorded with two-photon imaging and electrophysiology, bioRxiv, https://doi.org/10.1101/2020.08.10.244723
• Takasaki, Kevin, et al. 3-Photon Calcium Imaging of Deep Cortical Layers for Functional Connectomics. The Optical Society, 2019, p. BM4A.4, doi:10.1364/brain.2019.bm4a.4.
• Jia, Xiaoxuan, et al. “High-Density Extracellular Probes Reveal Dendritic Backpropagation and Facilitate Neuron Classification.” BioRxiv, Cold Spring Harbor Laboratory, July 2018, p. 376863, doi:10.1101/376863.
• Denman, Daniel J., and R. Clay Reid. “Synergistic Population Encoding and Precise Coordinated Variability across Interlaminar Ensembles in the Early Visual System.” BioRxiv, Cold Spring Harbor Laboratory, 2019, p. 812859, doi:10.1101/812859.
• Siegle, Joshua H., et al. “A Survey of Spiking Activity Reveals a Functional Hierarchy of Mouse Corticothalamic Visual Areas.” BioRxiv, Cold Spring Harbor Laboratory, Oct. 2019, p. 805010, doi:10.1101/805010.
• Incomplete remyelination via therapeutically enhanced oligodendrogenesis is sufficient to recover visual cortical function Nature Communications
• Deciphering neuronal variability across states reveals dynamic sensory encoding Nature Communications

Practice Locations

UCHealth Anschutz Outpatient Pavilion - Anschutz Medical Campus
1635 Aurora Ct
Aurora, CO 80045
720-848-0000